Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc5a7Q8BGY9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm10231-201ENSMUST00000181584 441 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm10175-202ENSMUST00000208752 441 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm18246-201ENSMUST00000221023 728 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc5a7Q8BGY9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc5a7Q8BGY9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms