Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gm9522-201ENSMUST00000182394 926 ntBASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh19Q80TF3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh19Q80TF3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh19Q80TF3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms