Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TwistnbQ78WZ7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TwistnbQ78WZ7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TwistnbQ78WZ7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TwistnbQ78WZ7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TwistnbQ78WZ7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TwistnbQ78WZ7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TwistnbQ78WZ7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.45□□□□□ -0.1
TwistnbQ78WZ7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms