Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a2Q64739 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a2Q64739 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.81■□□□□ 0.28
Col11a2Q64739 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.81■□□□□ 0.28
Col11a2Q64739 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a2Q64739 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a2Q64739 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.81■□□□□ 0.28
Col11a2Q64739 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a2Q64739 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col11a2Q64739 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.8■□□□□ 0.28
Col11a2Q64739 Gm11964-201ENSMUST00000120982 444 ntBASIC16.8■□□□□ 0.28
Col11a2Q64739 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a2Q64739 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a2Q64739 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm45186-201ENSMUST00000206874 478 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.79■□□□□ 0.28
Col11a2Q64739 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.79■□□□□ 0.28
Col11a2Q64739 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm12363-201ENSMUST00000122250 668 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm8584-201ENSMUST00000171982 758 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.79■□□□□ 0.28
Col11a2Q64739 Gm16372-201ENSMUST00000073088 450 ntBASIC16.79■□□□□ 0.28
Col11a2Q64739 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a2Q64739 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.78■□□□□ 0.28
Col11a2Q64739 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.78■□□□□ 0.28
Col11a2Q64739 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.78■□□□□ 0.28
Col11a2Q64739 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col11a2Q64739 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms