Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.67□□□□□ -0.22
Sdc3Q64519 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.67□□□□□ -0.22
Sdc3Q64519 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Sdc3Q64519 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Gm6222-201ENSMUST00000120787 396 ntBASIC13.67□□□□□ -0.22
Sdc3Q64519 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.67□□□□□ -0.22
Sdc3Q64519 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sdc3Q64519 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sdc3Q64519 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Mir1897-201ENSMUST00000122581 272 ntBASIC13.66□□□□□ -0.22
Sdc3Q64519 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.66□□□□□ -0.22
Sdc3Q64519 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Gm27533-201ENSMUST00000183800 152 ntBASIC13.66□□□□□ -0.22
Sdc3Q64519 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.66□□□□□ -0.22
Sdc3Q64519 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sdc3Q64519 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sdc3Q64519 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sdc3Q64519 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sdc3Q64519 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.65□□□□□ -0.22
Sdc3Q64519 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sdc3Q64519 Gm5566-201ENSMUST00000116118 459 ntBASIC13.65□□□□□ -0.22
Sdc3Q64519 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sdc3Q64519 Gm7063-201ENSMUST00000186840 981 ntBASIC13.65□□□□□ -0.22
Sdc3Q64519 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms