Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.93■□□□□ 0.46
Clcn1Q64347 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Gm17795-201ENSMUST00000214505 757 ntBASIC17.93■□□□□ 0.46
Clcn1Q64347 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.93■□□□□ 0.46
Clcn1Q64347 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
Clcn1Q64347 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.93■□□□□ 0.46
Clcn1Q64347 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.93■□□□□ 0.46
Clcn1Q64347 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn1Q64347 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clcn1Q64347 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Clcn1Q64347 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.92■□□□□ 0.46
Clcn1Q64347 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.92■□□□□ 0.46
Clcn1Q64347 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.92■□□□□ 0.46
Clcn1Q64347 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn1Q64347 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.91■□□□□ 0.46
Clcn1Q64347 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.91■□□□□ 0.46
Clcn1Q64347 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Clcn1Q64347 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn1Q64347 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn1Q64347 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.9■□□□□ 0.46
Clcn1Q64347 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms