Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Efs-202ENSMUST00000227037 2540 ntBASIC10.94□□□□□ -0.66
Notch3Q61982 Gm14042-201ENSMUST00000120139 833 ntBASIC10.94□□□□□ -0.66
Notch3Q61982 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.94□□□□□ -0.66
Notch3Q61982 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.94□□□□□ -0.66
Notch3Q61982 Gm45384-201ENSMUST00000210451 277 ntBASIC10.94□□□□□ -0.66
Notch3Q61982 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Notch3Q61982 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.94□□□□□ -0.66
Notch3Q61982 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Notch3Q61982 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Notch3Q61982 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Notch3Q61982 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.94□□□□□ -0.66
Notch3Q61982 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.93□□□□□ -0.66
Notch3Q61982 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Notch3Q61982 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Notch3Q61982 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Notch3Q61982 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.93□□□□□ -0.66
Notch3Q61982 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Mir6420-201ENSMUST00000185032 102 ntBASIC10.93□□□□□ -0.66
Notch3Q61982 AY702102-202ENSMUST00000194651 1173 ntBASIC10.93□□□□□ -0.66
Notch3Q61982 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.93□□□□□ -0.66
Notch3Q61982 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Notch3Q61982 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Gm24543-201ENSMUST00000103867 82 ntBASIC10.92□□□□□ -0.66
Notch3Q61982 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Notch3Q61982 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Gm23984-201ENSMUST00000157139 203 ntBASIC10.92□□□□□ -0.66
Notch3Q61982 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.92□□□□□ -0.66
Notch3Q61982 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.92□□□□□ -0.66
Notch3Q61982 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.92□□□□□ -0.66
Notch3Q61982 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.92□□□□□ -0.66
Notch3Q61982 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Notch3Q61982 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Notch3Q61982 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Notch3Q61982 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Notch3Q61982 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms