Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Arhgef40Q3UPH7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm7029-201ENSMUST00000173226 450 ntBASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm3961-201ENSMUST00000204425 994 ntBASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Arhgef40Q3UPH7 Gm12020-201ENSMUST00000119030 2042 ntBASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm15770-201ENSMUST00000117498 584 ntBASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm42550-201ENSMUST00000201553 960 ntBASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Gm10339-203ENSMUST00000225409 1671 ntBASIC20.51■□□□□ 0.87
Arhgef40Q3UPH7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm12384-201ENSMUST00000119228 919 ntBASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm19184-201ENSMUST00000196798 928 ntBASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Gm10040-201ENSMUST00000080726 1662 ntBASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Arhgef40Q3UPH7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Gm38002-201ENSMUST00000193255 180 ntBASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Arhgef40Q3UPH7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms