Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.61■□□□□ 0.25
Col5a2Q3U962 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm37497-201ENSMUST00000195830 798 ntBASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col5a2Q3U962 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm25927-201ENSMUST00000175058 117 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm6334-201ENSMUST00000207083 228 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm9368-201ENSMUST00000219348 831 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.6■□□□□ 0.25
Col5a2Q3U962 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col5a2Q3U962 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Mir686-201ENSMUST00000102174 109 ntBASIC16.59■□□□□ 0.25
Col5a2Q3U962 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col5a2Q3U962 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col5a2Q3U962 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Col5a2Q3U962 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col5a2Q3U962 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col5a2Q3U962 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col5a2Q3U962 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Gm25261-201ENSMUST00000157416 134 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Gm8227-201ENSMUST00000223306 571 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.58■□□□□ 0.24
Col5a2Q3U962 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col5a2Q3U962 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms