Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hddc2Q3SXD3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hddc2Q3SXD3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hddc2Q3SXD3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Gm8344-201ENSMUST00000119813 856 ntBASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Gm6345-202ENSMUST00000180900 204 ntBASIC13.15□□□□□ -0.3
Hddc2Q3SXD3 Gm44454-201ENSMUST00000198541 138 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms