Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chd8Q09XV5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.56□□□□□ -0.4
Chd8Q09XV5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.56□□□□□ -0.4
Chd8Q09XV5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.56□□□□□ -0.4
Chd8Q09XV5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.56□□□□□ -0.4
Chd8Q09XV5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chd8Q09XV5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm11801-201ENSMUST00000117807 746 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm2451-201ENSMUST00000199447 999 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm10290-201ENSMUST00000200451 999 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chd8Q09XV5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chd8Q09XV5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms