Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.44□□□□□ -0.26
Nkx3-2P97503 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx3-2P97503 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Gm27838-201ENSMUST00000184829 128 ntBASIC13.43□□□□□ -0.26
Nkx3-2P97503 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Shd-206ENSMUST00000225145 998 ntBASIC13.43□□□□□ -0.26
Nkx3-2P97503 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.43□□□□□ -0.26
Nkx3-2P97503 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.43□□□□□ -0.26
Nkx3-2P97503 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Nkx3-2P97503 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx3-2P97503 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.42□□□□□ -0.26
Nkx3-2P97503 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm14719-201ENSMUST00000121891 340 ntBASIC13.42□□□□□ -0.26
Nkx3-2P97503 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm27631-201ENSMUST00000184163 466 ntBASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Gm45453-201ENSMUST00000211758 853 ntBASIC13.42□□□□□ -0.26
Nkx3-2P97503 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.42□□□□□ -0.26
Nkx3-2P97503 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx3-2P97503 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx3-2P97503 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.41□□□□□ -0.26
Nkx3-2P97503 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx3-2P97503 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms