Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcc1P97496 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm8927-201ENSMUST00000181978 981 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm40466-201ENSMUST00000212174 422 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm3222-201ENSMUST00000071282 990 ntBASIC17.67■□□□□ 0.42
Smarcc1P97496 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcc1P97496 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcc1P97496 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Gm24196-201ENSMUST00000179161 110 ntBASIC17.66■□□□□ 0.42
Smarcc1P97496 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smarcc1P97496 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcc1P97496 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Gm13612-201ENSMUST00000119276 390 ntBASIC17.65■□□□□ 0.42
Smarcc1P97496 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.65■□□□□ 0.42
Smarcc1P97496 Gm5370-201ENSMUST00000187187 574 ntBASIC17.65■□□□□ 0.42
Smarcc1P97496 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Smarcc1P97496 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarcc1P97496 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.65■□□□□ 0.42
Smarcc1P97496 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smarcc1P97496 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.65■□□□□ 0.42
Smarcc1P97496 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcc1P97496 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Smarcc1P97496 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcc1P97496 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcc1P97496 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm12485-201ENSMUST00000119641 291 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms