Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.82□□□□□ -0.68
Vamp3P63024 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Vamp3P63024 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vamp3P63024 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp3P63024 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.81□□□□□ -0.68
Vamp3P63024 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vamp3P63024 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm7791-201ENSMUST00000219066 539 ntBASIC10.81□□□□□ -0.68
Vamp3P63024 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vamp3P63024 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vamp3P63024 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Vamp3P63024 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Vamp3P63024 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.81□□□□□ -0.68
Vamp3P63024 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.81□□□□□ -0.68
Vamp3P63024 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.81□□□□□ -0.68
Vamp3P63024 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Vamp3P63024 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp3P63024 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Vamp3P63024 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Vamp3P63024 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.8□□□□□ -0.68
Vamp3P63024 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Vamp3P63024 Gm11336-201ENSMUST00000118168 334 ntBASIC10.8□□□□□ -0.68
Vamp3P63024 Gm12821-201ENSMUST00000120022 600 ntBASIC10.8□□□□□ -0.68
Vamp3P63024 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.8□□□□□ -0.68
Vamp3P63024 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC10.8□□□□□ -0.68
Vamp3P63024 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.8□□□□□ -0.68
Vamp3P63024 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.8□□□□□ -0.68
Vamp3P63024 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp3P63024 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vamp3P63024 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vamp3P63024 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms