Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox18P43680 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox18P43680 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.62□□□□□ -0.23
Sox18P43680 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox18P43680 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Sox18P43680 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox18P43680 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox18P43680 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox18P43680 Celf4-206ENSMUST00000224553 1729 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Gm11814-201ENSMUST00000119515 929 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Gm27572-201ENSMUST00000183702 255 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox18P43680 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Gm37436-201ENSMUST00000193842 1085 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Gm43037-201ENSMUST00000196808 250 ntBASIC13.61□□□□□ -0.23
Sox18P43680 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox18P43680 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox18P43680 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox18P43680 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sox18P43680 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox18P43680 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox18P43680 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sox18P43680 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.6□□□□□ -0.23
Sox18P43680 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sox18P43680 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.6□□□□□ -0.23
Sox18P43680 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox18P43680 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox18P43680 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.6□□□□□ -0.23
Sox18P43680 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.6□□□□□ -0.23
Sox18P43680 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Gm7399-201ENSMUST00000032395 858 ntBASIC13.6□□□□□ -0.23
Sox18P43680 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms