Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.12□□□□□ -0.15
Nckap1P28660 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Gm19220-201ENSMUST00000222682 803 ntBASIC14.12□□□□□ -0.15
Nckap1P28660 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Nckap1P28660 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nckap1P28660 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nckap1P28660 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nckap1P28660 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.11□□□□□ -0.15
Nckap1P28660 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.11□□□□□ -0.15
Nckap1P28660 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
Nckap1P28660 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nckap1P28660 Gm4804-201ENSMUST00000182234 999 ntBASIC14.11□□□□□ -0.15
Nckap1P28660 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.11□□□□□ -0.15
Nckap1P28660 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.11□□□□□ -0.15
Nckap1P28660 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Nckap1P28660 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.11□□□□□ -0.15
Nckap1P28660 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.11□□□□□ -0.15
Nckap1P28660 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nckap1P28660 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nckap1P28660 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.1□□□□□ -0.15
Nckap1P28660 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nckap1P28660 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm11478-201ENSMUST00000117851 599 ntBASIC14.1□□□□□ -0.15
Nckap1P28660 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nckap1P28660 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm21470-201ENSMUST00000187680 696 ntBASIC14.1□□□□□ -0.15
Nckap1P28660 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.1□□□□□ -0.15
Nckap1P28660 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.1□□□□□ -0.15
Nckap1P28660 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.1□□□□□ -0.15
Nckap1P28660 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm6180-201ENSMUST00000065243 498 ntBASIC14.1□□□□□ -0.15
Nckap1P28660 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nckap1P28660 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nckap1P28660 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.1□□□□□ -0.15
Nckap1P28660 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.1□□□□□ -0.15
Nckap1P28660 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nckap1P28660 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nckap1P28660 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms