Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Gm15165-201ENSMUST00000118140 502 ntBASIC14.4□□□□□ -0.1
VimP20152 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.4□□□□□ -0.1
VimP20152 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.4□□□□□ -0.1
VimP20152 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.4□□□□□ -0.1
VimP20152 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VimP20152 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.4□□□□□ -0.1
VimP20152 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VimP20152 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.4□□□□□ -0.1
VimP20152 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VimP20152 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
VimP20152 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
VimP20152 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VimP20152 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VimP20152 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.39□□□□□ -0.11
VimP20152 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.39□□□□□ -0.11
VimP20152 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.39□□□□□ -0.11
VimP20152 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
VimP20152 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VimP20152 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.39□□□□□ -0.11
VimP20152 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
VimP20152 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VimP20152 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VimP20152 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VimP20152 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VimP20152 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gm8749-201ENSMUST00000117737 331 ntBASIC14.38□□□□□ -0.11
VimP20152 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.38□□□□□ -0.11
VimP20152 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gm5587-201ENSMUST00000206270 674 ntBASIC14.38□□□□□ -0.11
VimP20152 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gm18032-201ENSMUST00000222541 538 ntBASIC14.38□□□□□ -0.11
VimP20152 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.38□□□□□ -0.11
VimP20152 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VimP20152 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VimP20152 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VimP20152 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VimP20152 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms