Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cntn1P12960 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.62□□□□□ -0.23
Cntn1P12960 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cntn1P12960 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cntn1P12960 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.62□□□□□ -0.23
Cntn1P12960 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.62□□□□□ -0.23
Cntn1P12960 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.62□□□□□ -0.23
Cntn1P12960 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cntn1P12960 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cntn1P12960 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Gm23547-201ENSMUST00000158210 271 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Gm44855-201ENSMUST00000205725 362 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 Gm7730-201ENSMUST00000212486 454 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.61□□□□□ -0.23
Cntn1P12960 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cntn1P12960 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cntn1P12960 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cntn1P12960 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.6□□□□□ -0.23
Cntn1P12960 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cntn1P12960 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Gm12882-201ENSMUST00000121696 517 ntBASIC13.6□□□□□ -0.23
Cntn1P12960 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.6□□□□□ -0.23
Cntn1P12960 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.6□□□□□ -0.23
Cntn1P12960 Gm29667-201ENSMUST00000190817 490 ntBASIC13.6□□□□□ -0.23
Cntn1P12960 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cntn1P12960 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.6□□□□□ -0.23
Cntn1P12960 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.6□□□□□ -0.23
Cntn1P12960 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cntn1P12960 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms