Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccl3P10855 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccl3P10855 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccl3P10855 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm27847-201ENSMUST00000183711 107 ntBASIC12.47□□□□□ -0.41
Ccl3P10855 Gm27375-201ENSMUST00000183799 107 ntBASIC12.47□□□□□ -0.41
Ccl3P10855 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm7561-201ENSMUST00000211203 886 ntBASIC12.47□□□□□ -0.41
Ccl3P10855 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccl3P10855 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccl3P10855 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccl3P10855 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccl3P10855 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccl3P10855 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccl3P10855 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm13689-201ENSMUST00000119360 685 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm8062-201ENSMUST00000139696 444 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Snora78-201ENSMUST00000158630 128 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm27772-201ENSMUST00000184900 187 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Gm45331-201ENSMUST00000209868 554 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Ccl3P10855 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Gm6091-201ENSMUST00000098307 165 ntBASIC12.46□□□□□ -0.41
Ccl3P10855 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl3P10855 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccl3P10855 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.46□□□□□ -0.42
Ccl3P10855 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.46□□□□□ -0.42
Ccl3P10855 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccl3P10855 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl3P10855 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms