Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nid1P10493 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nid1P10493 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.31□□□□□ -0.28
Nid1P10493 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nid1P10493 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nid1P10493 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nid1P10493 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.31□□□□□ -0.28
Nid1P10493 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Gm4995-201ENSMUST00000117247 432 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Gm13015-201ENSMUST00000118674 204 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Gm13365-201ENSMUST00000121188 973 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.3□□□□□ -0.28
Nid1P10493 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nid1P10493 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nid1P10493 AA619741-201ENSMUST00000195095 646 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.3□□□□□ -0.28
Nid1P10493 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.3□□□□□ -0.28
Nid1P10493 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.3□□□□□ -0.28
Nid1P10493 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.3□□□□□ -0.28
Nid1P10493 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nid1P10493 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nid1P10493 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.29□□□□□ -0.28
Nid1P10493 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nid1P10493 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nid1P10493 Gm25287-201ENSMUST00000103846 110 ntBASIC13.29□□□□□ -0.28
Nid1P10493 Gm22918-201ENSMUST00000103855 110 ntBASIC13.29□□□□□ -0.28
Nid1P10493 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.29□□□□□ -0.28
Nid1P10493 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.29□□□□□ -0.28
Nid1P10493 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.29□□□□□ -0.28
Nid1P10493 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.29□□□□□ -0.28
Nid1P10493 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nid1P10493 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Nid1P10493 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nid1P10493 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nid1P10493 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nid1P10493 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nid1P10493 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.28□□□□□ -0.28
Nid1P10493 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nid1P10493 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nid1P10493 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nid1P10493 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nid1P10493 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nid1P10493 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms