Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.48□□□□□ -0.41
P04224 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.48□□□□□ -0.41
P04224 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
P04224 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.48□□□□□ -0.41
P04224 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P04224 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P04224 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P04224 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.47□□□□□ -0.41
P04224 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
P04224 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
P04224 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.47□□□□□ -0.41
P04224 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.47□□□□□ -0.41
P04224 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.47□□□□□ -0.41
P04224 Gm43767-201ENSMUST00000198933 381 ntBASIC12.47□□□□□ -0.41
P04224 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
P04224 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
P04224 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.47□□□□□ -0.41
P04224 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.47□□□□□ -0.41
P04224 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P04224 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.46□□□□□ -0.41
P04224 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.46□□□□□ -0.41
P04224 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
P04224 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.46□□□□□ -0.41
P04224 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
P04224 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.46□□□□□ -0.41
P04224 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.46□□□□□ -0.41
P04224 Gm17807-201ENSMUST00000186869 298 ntBASIC12.46□□□□□ -0.41
P04224 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.46□□□□□ -0.41
P04224 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.46□□□□□ -0.41
P04224 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
P04224 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.46□□□□□ -0.41
P04224 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.46□□□□□ -0.42
P04224 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
P04224 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
P04224 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.46□□□□□ -0.42
P04224 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
P04224 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.45□□□□□ -0.42
P04224 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.45□□□□□ -0.42
P04224 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
P04224 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
P04224 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
P04224 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms