Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.92□□□□□ -0.5
Hoxa3P02831 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hoxa3P02831 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gm44344-201ENSMUST00000200287 129 ntBASIC11.92□□□□□ -0.5
Hoxa3P02831 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.92□□□□□ -0.5
Hoxa3P02831 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gm2423-201ENSMUST00000074863 733 ntBASIC11.92□□□□□ -0.5
Hoxa3P02831 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hoxa3P02831 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa3P02831 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Mir7684-201ENSMUST00000183858 60 ntBASIC11.91□□□□□ -0.5
Hoxa3P02831 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.91□□□□□ -0.5
Hoxa3P02831 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa3P02831 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa3P02831 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxa3P02831 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa3P02831 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxa3P02831 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 Mir1897-201ENSMUST00000122581 272 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Gm27631-201ENSMUST00000184163 466 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa3P02831 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa3P02831 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms