Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Gm27533-201ENSMUST00000183800 152 ntBASIC17.15■□□□□ 0.34
Hoxa7P02830 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxa7P02830 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxa7P02830 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hoxa7P02830 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Hoxa7P02830 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Hoxa7P02830 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hoxa7P02830 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Hoxa7P02830 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Mir698-201ENSMUST00000102164 109 ntBASIC17.14■□□□□ 0.33
Hoxa7P02830 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Gm12585-201ENSMUST00000117307 290 ntBASIC17.14■□□□□ 0.33
Hoxa7P02830 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.14■□□□□ 0.33
Hoxa7P02830 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.14■□□□□ 0.33
Hoxa7P02830 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.14■□□□□ 0.33
Hoxa7P02830 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hoxa7P02830 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hoxa7P02830 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Gm27680-201ENSMUST00000184192 160 ntBASIC17.13■□□□□ 0.33
Hoxa7P02830 Gm6916-202ENSMUST00000205523 195 ntBASIC17.13■□□□□ 0.33
Hoxa7P02830 Gm5779-201ENSMUST00000218467 910 ntBASIC17.13■□□□□ 0.33
Hoxa7P02830 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Hoxa7P02830 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa7P02830 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Hoxa7P02830 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.12■□□□□ 0.33
Hoxa7P02830 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.12■□□□□ 0.33
Hoxa7P02830 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa7P02830 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa7P02830 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa7P02830 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Hoxa7P02830 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa7P02830 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Hoxa7P02830 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa7P02830 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms