Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Col4a1P02463 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a1P02463 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Col4a1P02463 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Gm15770-201ENSMUST00000117498 584 ntBASIC17.13■□□□□ 0.33
Col4a1P02463 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a1P02463 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col4a1P02463 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.13■□□□□ 0.33
Col4a1P02463 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.13■□□□□ 0.33
Col4a1P02463 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.13■□□□□ 0.33
Col4a1P02463 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col4a1P02463 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col4a1P02463 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col4a1P02463 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.13■□□□□ 0.33
Col4a1P02463 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a1P02463 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Col4a1P02463 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a1P02463 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col4a1P02463 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a1P02463 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a1P02463 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a1P02463 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.11■□□□□ 0.33
Col4a1P02463 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Col4a1P02463 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Gm5370-201ENSMUST00000187187 574 ntBASIC17.11■□□□□ 0.33
Col4a1P02463 Gm9257-201ENSMUST00000221254 232 ntBASIC17.11■□□□□ 0.33
Col4a1P02463 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col4a1P02463 Olfr582-201ENSMUST00000098212 960 ntBASIC17.11■□□□□ 0.33
Col4a1P02463 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col4a1P02463 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col4a1P02463 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.11■□□□□ 0.33
Col4a1P02463 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.11■□□□□ 0.33
Col4a1P02463 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Col4a1P02463 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a1P02463 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm8213-201ENSMUST00000118191 441 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 Gm14723-201ENSMUST00000118686 215 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm19184-201ENSMUST00000196798 928 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms