Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
IghmP01872 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
IghmP01872 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
IghmP01872 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.29□□□□□ -0.28
IghmP01872 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
IghmP01872 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
IghmP01872 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IghmP01872 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.28□□□□□ -0.28
IghmP01872 Gm25911-201ENSMUST00000157621 56 ntBASIC13.28□□□□□ -0.28
IghmP01872 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IghmP01872 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IghmP01872 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.28□□□□□ -0.28
IghmP01872 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
IghmP01872 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
IghmP01872 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IghmP01872 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.28□□□□□ -0.28
IghmP01872 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IghmP01872 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.27□□□□□ -0.28
IghmP01872 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
IghmP01872 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
IghmP01872 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.27□□□□□ -0.28
IghmP01872 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
IghmP01872 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.27□□□□□ -0.28
IghmP01872 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IghmP01872 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.27□□□□□ -0.29
IghmP01872 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.27□□□□□ -0.29
IghmP01872 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
IghmP01872 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.27□□□□□ -0.29
IghmP01872 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.27□□□□□ -0.29
IghmP01872 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.27□□□□□ -0.29
IghmP01872 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.27□□□□□ -0.29
IghmP01872 AW822252-206ENSMUST00000208904 237 ntBASIC13.27□□□□□ -0.29
IghmP01872 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.27□□□□□ -0.29
IghmP01872 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.27□□□□□ -0.29
IghmP01872 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.27□□□□□ -0.29
IghmP01872 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.27□□□□□ -0.29
IghmP01872 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IghmP01872 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.27□□□□□ -0.29
IghmP01872 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
IghmP01872 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
IghmP01872 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IghmP01872 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms