Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
P01808 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
P01808 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
P01808 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.85□□□□□ -0.35
P01808 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.85□□□□□ -0.35
P01808 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.85□□□□□ -0.35
P01808 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.85□□□□□ -0.35
P01808 Gm17837-201ENSMUST00000186435 985 ntBASIC12.85□□□□□ -0.35
P01808 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Gm6916-202ENSMUST00000205523 195 ntBASIC12.85□□□□□ -0.35
P01808 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P01808 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.85□□□□□ -0.35
P01808 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.85□□□□□ -0.35
P01808 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.85□□□□□ -0.35
P01808 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.85□□□□□ -0.35
P01808 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P01808 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
P01808 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
P01808 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
P01808 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
P01808 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.84□□□□□ -0.35
P01808 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.84□□□□□ -0.35
P01808 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.84□□□□□ -0.35
P01808 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.84□□□□□ -0.35
P01808 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.84□□□□□ -0.35
P01808 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P01808 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
P01808 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P01808 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.84□□□□□ -0.35
P01808 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P01808 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.83□□□□□ -0.35
P01808 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P01808 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
P01808 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
P01808 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.83□□□□□ -0.35
P01808 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P01808 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
P01808 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
P01808 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Gm15653-201ENSMUST00000119247 907 ntBASIC12.83□□□□□ -0.36
P01808 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.83□□□□□ -0.36
P01808 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.83□□□□□ -0.36
P01808 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.83□□□□□ -0.36
P01808 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
P01808 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.83□□□□□ -0.36
P01808 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.83□□□□□ -0.36
P01808 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.83□□□□□ -0.36
P01808 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.83□□□□□ -0.36
P01808 Gm46209-201ENSMUST00000217912 553 ntBASIC12.83□□□□□ -0.36
P01808 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.83□□□□□ -0.36
P01808 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P01808 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms