Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.62□□□□□ -0.23
Hcn1O88704 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Gm8396-201ENSMUST00000057361 823 ntBASIC13.62□□□□□ -0.23
Hcn1O88704 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.62□□□□□ -0.23
Hcn1O88704 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hcn1O88704 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Hcn1O88704 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hcn1O88704 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hcn1O88704 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Hcn1O88704 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hcn1O88704 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Gm14701-201ENSMUST00000117156 348 ntBASIC13.61□□□□□ -0.23
Hcn1O88704 Gm11543-201ENSMUST00000120758 370 ntBASIC13.61□□□□□ -0.23
Hcn1O88704 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Gm43125-201ENSMUST00000201724 730 ntBASIC13.61□□□□□ -0.23
Hcn1O88704 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.61□□□□□ -0.23
Hcn1O88704 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Hcn1O88704 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcn1O88704 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcn1O88704 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Hcn1O88704 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hcn1O88704 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.6□□□□□ -0.23
Hcn1O88704 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hcn1O88704 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hcn1O88704 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Hcn1O88704 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hcn1O88704 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.6□□□□□ -0.23
Hcn1O88704 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.6□□□□□ -0.23
Hcn1O88704 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcn1O88704 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hcn1O88704 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.6□□□□□ -0.23
Hcn1O88704 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hcn1O88704 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.6□□□□□ -0.23
Hcn1O88704 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcn1O88704 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcn1O88704 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.59□□□□□ -0.23
Hcn1O88704 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Hcn1O88704 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcn1O88704 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms