Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.19□□□□□ -0.3
BckdkO55028 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.19□□□□□ -0.3
BckdkO55028 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BckdkO55028 Gm27920-201ENSMUST00000183953 96 ntBASIC13.19□□□□□ -0.3
BckdkO55028 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.19□□□□□ -0.3
BckdkO55028 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
BckdkO55028 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
BckdkO55028 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.19□□□□□ -0.3
BckdkO55028 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.19□□□□□ -0.3
BckdkO55028 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BckdkO55028 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BckdkO55028 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BckdkO55028 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BckdkO55028 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.18□□□□□ -0.3
BckdkO55028 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.18□□□□□ -0.3
BckdkO55028 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.18□□□□□ -0.3
BckdkO55028 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BckdkO55028 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BckdkO55028 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.17□□□□□ -0.3
BckdkO55028 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BckdkO55028 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.17□□□□□ -0.3
BckdkO55028 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
BckdkO55028 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BckdkO55028 Gm6415-201ENSMUST00000118488 348 ntBASIC13.17□□□□□ -0.3
BckdkO55028 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.17□□□□□ -0.3
BckdkO55028 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms