Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Alx4O35137 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Alx4O35137 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.66□□□□□ -0.38
Alx4O35137 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.66□□□□□ -0.38
Alx4O35137 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Alx4O35137 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Alx4O35137 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Alx4O35137 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.66□□□□□ -0.38
Alx4O35137 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Gm15590-201ENSMUST00000078419 552 ntBASIC12.66□□□□□ -0.38
Alx4O35137 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Alx4O35137 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Alx4O35137 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Alx4O35137 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Alx4O35137 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx4O35137 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.65□□□□□ -0.38
Alx4O35137 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Alx4O35137 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.65□□□□□ -0.38
Alx4O35137 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.65□□□□□ -0.38
Alx4O35137 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx4O35137 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Alx4O35137 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.65□□□□□ -0.38
Alx4O35137 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.65□□□□□ -0.38
Alx4O35137 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx4O35137 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.65□□□□□ -0.38
Alx4O35137 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Alx4O35137 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Alx4O35137 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.65□□□□□ -0.38
Alx4O35137 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx4O35137 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.65□□□□□ -0.38
Alx4O35137 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Alx4O35137 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Alx4O35137 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx4O35137 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx4O35137 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx4O35137 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms