Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gm5866-201ENSMUST00000177881 973 ntBASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Gm6218-201ENSMUST00000219812 628 ntBASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb9E9Q5G2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Syt7-205ENSMUST00000224135 1557 ntBASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm8584-201ENSMUST00000171982 758 ntBASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb9E9Q5G2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm7488-201ENSMUST00000117148 684 ntBASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm42612-201ENSMUST00000197986 623 ntBASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm43170-201ENSMUST00000199827 612 ntBASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb9E9Q5G2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb9E9Q5G2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms