Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm13464-201ENSMUST00000119418 935 ntBASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm44454-201ENSMUST00000198541 138 ntBASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm18959-201ENSMUST00000208954 655 ntBASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccnb1ip1D3Z3K2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccnb1ip1D3Z3K2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm13836-201ENSMUST00000121159 501 ntBASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm6623-201ENSMUST00000173570 544 ntBASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ccnb1ip1D3Z3K2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccnb1ip1D3Z3K2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccnb1ip1D3Z3K2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccnb1ip1D3Z3K2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms