Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm7506-201ENSMUST00000207758 815 ntBASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm8097-201ENSMUST00000117903 829 ntBASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav3n-3A0A0G2JEM0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms