Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rprl2-201ENSMUST00000157150 290 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm18057-201ENSMUST00000208220 503 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm45612-201ENSMUST00000211320 160 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav9n-2A0A0G2JDP3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav9n-2A0A0G2JDP3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav9n-2A0A0G2JDP3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms