Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5-4A0A075B652 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm14042-201ENSMUST00000120139 833 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm12260-201ENSMUST00000122447 411 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm44492-201ENSMUST00000197012 141 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm45098-201ENSMUST00000207179 657 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav5-4A0A075B652 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav5-4A0A075B652 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav5-4A0A075B652 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav5-4A0A075B652 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav5-4A0A075B652 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Gm15483-201ENSMUST00000120338 456 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5-4A0A075B652 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms