Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Gm7230-201ENSMUST00000173026 815 ntBASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Gm6550-201ENSMUST00000187574 993 ntBASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Gm37230-201ENSMUST00000194491 818 ntBASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1bQ9Z2C6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gm2272-201ENSMUST00000194903 582 ntBASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1bQ9Z2C6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Gm15173-201ENSMUST00000122049 433 ntBASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Gm16026-204ENSMUST00000162652 683 ntBASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk1bQ9Z2C6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms