Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf4Q9QZS2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf4Q9QZS2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf4Q9QZS2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf4Q9QZS2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf4Q9QZS2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms