Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ube4bQ9ES00 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Gm19164-201ENSMUST00000210667 640 ntBASIC13.66□□□□□ -0.22
Ube4bQ9ES00 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube4bQ9ES00 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.65□□□□□ -0.22
Ube4bQ9ES00 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube4bQ9ES00 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.65□□□□□ -0.23
Ube4bQ9ES00 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ube4bQ9ES00 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Ube4bQ9ES00 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube4bQ9ES00 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms