Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Gm24158-201ENSMUST00000175263 71 ntBASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ddx56Q9D0R4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm15957-201ENSMUST00000118893 974 ntBASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm18766-201ENSMUST00000189811 808 ntBASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm29541-201ENSMUST00000191351 678 ntBASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ddx56Q9D0R4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx56Q9D0R4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Ddx56Q9D0R4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx56Q9D0R4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Ddx56Q9D0R4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx56Q9D0R4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 AA619741-201ENSMUST00000195095 646 ntBASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx56Q9D0R4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 BC001981-202ENSMUST00000191393 1545 ntBASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Gm27631-201ENSMUST00000184163 466 ntBASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.94□□□□□ -0.02
Ddx56Q9D0R4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms