Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm11425-201ENSMUST00000119608 498 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm17150-201ENSMUST00000165577 381 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm16476-201ENSMUST00000221544 139 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm9396-201ENSMUST00000076703 567 ntBASIC12.47□□□□□ -0.41
Scrt1Q99M85 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scrt1Q99M85 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.46□□□□□ -0.41
Scrt1Q99M85 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Gm5479-201ENSMUST00000160578 435 ntBASIC12.46□□□□□ -0.41
Scrt1Q99M85 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scrt1Q99M85 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.46□□□□□ -0.42
Scrt1Q99M85 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.46□□□□□ -0.42
Scrt1Q99M85 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm15653-201ENSMUST00000119247 907 ntBASIC12.45□□□□□ -0.42
Scrt1Q99M85 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm18624-201ENSMUST00000220966 658 ntBASIC12.45□□□□□ -0.42
Scrt1Q99M85 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.45□□□□□ -0.42
Scrt1Q99M85 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm9797-201ENSMUST00000052902 613 ntBASIC12.45□□□□□ -0.42
Scrt1Q99M85 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scrt1Q99M85 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms