Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm21854-201ENSMUST00000179901 471 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm10766-202ENSMUST00000194123 606 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gm45668-201ENSMUST00000211271 493 ntBASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb18Q91Y02 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 BC001981-202ENSMUST00000191393 1545 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm12585-201ENSMUST00000117307 290 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm33320-201ENSMUST00000192232 530 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.87□□□□□ -0.03
Pcdhb18Q91Y02 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Gm15393-201ENSMUST00000120499 219 ntBASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Gm12138-201ENSMUST00000122180 951 ntBASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb18Q91Y02 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms