Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Gm37230-201ENSMUST00000194491 818 ntBASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Gm2272-201ENSMUST00000194903 582 ntBASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm15173-201ENSMUST00000122049 433 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm16026-204ENSMUST00000162652 683 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm45747-201ENSMUST00000212203 999 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.6□□□□□ -0.55
Nup35Q8R4R6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup35Q8R4R6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms