Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Gm27618-201ENSMUST00000183671 60 ntBASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Gm27533-201ENSMUST00000183800 152 ntBASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn1Q8K0T0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm12428-201ENSMUST00000119844 727 ntBASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm8584-201ENSMUST00000171982 758 ntBASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn1Q8K0T0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Gm25144-201ENSMUST00000179561 110 ntBASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Gm25352-201ENSMUST00000179815 110 ntBASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn1Q8K0T0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn1Q8K0T0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms