Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lysmd4Q8CC84 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm5479-201ENSMUST00000160578 435 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm27300-201ENSMUST00000184085 97 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm27335-201ENSMUST00000184758 97 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Gm18041-201ENSMUST00000218210 618 ntBASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lysmd4Q8CC84 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gm16198-201ENSMUST00000118766 670 ntBASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gm13597-201ENSMUST00000121239 375 ntBASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gm7862-201ENSMUST00000121461 292 ntBASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 AV026068-213ENSMUST00000223675 1171 ntBASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lysmd4Q8CC84 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms