Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Gm14042-201ENSMUST00000120139 833 ntBASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Gm27702-201ENSMUST00000184512 56 ntBASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Olfr286-202ENSMUST00000205305 969 ntBASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps9d1Q8C190 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps9d1Q8C190 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps9d1Q8C190 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps9d1Q8C190 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps9d1Q8C190 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.33□□□□□ -0.27
Vps9d1Q8C190 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Gm25925-201ENSMUST00000158314 306 ntBASIC13.33□□□□□ -0.28
Vps9d1Q8C190 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps9d1Q8C190 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm4995-201ENSMUST00000117247 432 ntBASIC13.32□□□□□ -0.28
Vps9d1Q8C190 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.32□□□□□ -0.28
Vps9d1Q8C190 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps9d1Q8C190 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms