Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm38671-201ENSMUST00000200573 130 ntBASIC11.06□□□□□ -0.64
Chd9Q8BYH8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm16397-201ENSMUST00000122201 494 ntBASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm2991-201ENSMUST00000173338 480 ntBASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gm7600-201ENSMUST00000209657 785 ntBASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chd9Q8BYH8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm13612-201ENSMUST00000119276 390 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm8894-201ENSMUST00000074642 666 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm8768-201ENSMUST00000220020 826 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms