Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Gm27701-201ENSMUST00000184498 110 ntBASIC17.97■□□□□ 0.47
Clcn1Q64347 Gm18558-201ENSMUST00000186253 1214 ntBASIC17.97■□□□□ 0.47
Clcn1Q64347 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Gm9899-201ENSMUST00000065519 555 ntBASIC17.97■□□□□ 0.47
Clcn1Q64347 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.97■□□□□ 0.47
Clcn1Q64347 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcn1Q64347 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcn1Q64347 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Clcn1Q64347 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clcn1Q64347 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcn1Q64347 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Mir6420-201ENSMUST00000185032 102 ntBASIC17.96■□□□□ 0.47
Clcn1Q64347 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.96■□□□□ 0.47
Clcn1Q64347 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcn1Q64347 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clcn1Q64347 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn1Q64347 Efs-202ENSMUST00000227037 2540 ntBASIC17.96■□□□□ 0.47
Clcn1Q64347 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Clcn1Q64347 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm9002-201ENSMUST00000178437 499 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Mir7654-201ENSMUST00000185082 70 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm21470-201ENSMUST00000187680 696 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm5279-201ENSMUST00000199575 745 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.95■□□□□ 0.46
Clcn1Q64347 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Clcn1Q64347 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn1Q64347 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn1Q64347 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clcn1Q64347 Gm6007-201ENSMUST00000208170 823 ntBASIC17.94■□□□□ 0.46
Clcn1Q64347 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms