Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.74■□□□□ 0.11
Ift88Q61371 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.74■□□□□ 0.11
Ift88Q61371 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.74■□□□□ 0.11
Ift88Q61371 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ift88Q61371 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.74■□□□□ 0.11
Ift88Q61371 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ift88Q61371 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ift88Q61371 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ift88Q61371 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ift88Q61371 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Ift88Q61371 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ift88Q61371 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ift88Q61371 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ift88Q61371 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.73■□□□□ 0.11
Ift88Q61371 Gm27920-201ENSMUST00000183953 96 ntBASIC15.73■□□□□ 0.11
Ift88Q61371 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.73■□□□□ 0.11
Ift88Q61371 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ift88Q61371 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ift88Q61371 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.72■□□□□ 0.11
Ift88Q61371 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.72■□□□□ 0.11
Ift88Q61371 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.72■□□□□ 0.11
Ift88Q61371 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.72■□□□□ 0.11
Ift88Q61371 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.72■□□□□ 0.11
Ift88Q61371 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.72■□□□□ 0.11
Ift88Q61371 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.72■□□□□ 0.11
Ift88Q61371 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.72■□□□□ 0.11
Ift88Q61371 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ift88Q61371 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ift88Q61371 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ift88Q61371 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ift88Q61371 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ift88Q61371 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Ift88Q61371 Acot6-202ENSMUST00000222921 3622 ntBASIC15.72■□□□□ 0.11
Ift88Q61371 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.71■□□□□ 0.11
Ift88Q61371 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ift88Q61371 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.71■□□□□ 0.11
Ift88Q61371 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ift88Q61371 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.71■□□□□ 0.11
Ift88Q61371 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.71■□□□□ 0.11
Ift88Q61371 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ift88Q61371 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ift88Q61371 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.71■□□□□ 0.11
Ift88Q61371 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ift88Q61371 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.71■□□□□ 0.11
Ift88Q61371 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms