Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm26361-201ENSMUST00000158868 186 ntBASIC16.43■□□□□ 0.22
Rnf180Q3U827 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf180Q3U827 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf180Q3U827 Rn7s6-201ENSMUST00000175005 291 ntBASIC16.43■□□□□ 0.22
Rnf180Q3U827 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf180Q3U827 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.43■□□□□ 0.22
Rnf180Q3U827 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.43■□□□□ 0.22
Rnf180Q3U827 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf180Q3U827 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.43■□□□□ 0.22
Rnf180Q3U827 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf180Q3U827 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.43■□□□□ 0.22
Rnf180Q3U827 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf180Q3U827 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf180Q3U827 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.42■□□□□ 0.22
Rnf180Q3U827 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.42■□□□□ 0.22
Rnf180Q3U827 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.42■□□□□ 0.22
Rnf180Q3U827 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf180Q3U827 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Gm19459-201ENSMUST00000176240 835 ntBASIC16.41■□□□□ 0.22
Rnf180Q3U827 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.41■□□□□ 0.22
Rnf180Q3U827 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf180Q3U827 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.4■□□□□ 0.22
Rnf180Q3U827 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gm11675-201ENSMUST00000121873 832 ntBASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gm13123-201ENSMUST00000122173 492 ntBASIC16.4■□□□□ 0.22
Rnf180Q3U827 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rnf180Q3U827 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf180Q3U827 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms