Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Col17a1Q07563 Gm43195-201ENSMUST00000200614 2332 ntBASIC21.39■■□□□ 1.02
Col17a1Q07563 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col17a1Q07563 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col17a1Q07563 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col17a1Q07563 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Col17a1Q07563 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
Col17a1Q07563 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Col17a1Q07563 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Col17a1Q07563 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col17a1Q07563 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Col17a1Q07563 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC21.39■■□□□ 1.01
Col17a1Q07563 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Col17a1Q07563 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC21.39■■□□□ 1.01
Col17a1Q07563 AC166992.1-201ENSMUST00000216356 565 ntBASIC21.39■■□□□ 1.01
Col17a1Q07563 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col17a1Q07563 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Col17a1Q07563 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Col17a1Q07563 Gm13045-201ENSMUST00000119019 712 ntBASIC21.38■■□□□ 1.01
Col17a1Q07563 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC21.38■■□□□ 1.01
Col17a1Q07563 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Col17a1Q07563 Gm3671-201ENSMUST00000182463 1007 ntBASIC21.38■■□□□ 1.01
Col17a1Q07563 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC21.38■■□□□ 1.01
Col17a1Q07563 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC21.38■■□□□ 1.01
Col17a1Q07563 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col17a1Q07563 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gm14109-201ENSMUST00000118814 309 ntBASIC21.37■■□□□ 1.01
Col17a1Q07563 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Gm42779-201ENSMUST00000198807 406 ntBASIC21.37■■□□□ 1.01
Col17a1Q07563 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC21.37■■□□□ 1.01
Col17a1Q07563 Dhrs4-202ENSMUST00000226168 828 ntBASIC21.37■■□□□ 1.01
Col17a1Q07563 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Col17a1Q07563 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col17a1Q07563 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Col17a1Q07563 Gm14350-201ENSMUST00000116642 640 ntBASIC21.36■■□□□ 1.01
Col17a1Q07563 Gm12286-201ENSMUST00000119246 1002 ntBASIC21.36■■□□□ 1.01
Col17a1Q07563 Gm12029-201ENSMUST00000120073 832 ntBASIC21.36■■□□□ 1.01
Col17a1Q07563 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Col17a1Q07563 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC21.36■■□□□ 1.01
Col17a1Q07563 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC21.36■■□□□ 1.01
Col17a1Q07563 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC21.36■■□□□ 1.01
Col17a1Q07563 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col17a1Q07563 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC21.35■■□□□ 1.01
Col17a1Q07563 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC21.35■■□□□ 1.01
Col17a1Q07563 Gm17040-202ENSMUST00000170597 889 ntBASIC21.35■■□□□ 1.01
Col17a1Q07563 Gm27046-201ENSMUST00000182160 463 ntBASIC21.35■■□□□ 1.01
Col17a1Q07563 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Gm8325-201ENSMUST00000099086 453 ntBASIC21.35■■□□□ 1.01
Col17a1Q07563 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.35■■□□□ 1.01
Col17a1Q07563 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col17a1Q07563 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms