Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx2Q03358 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx2Q03358 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx2Q03358 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx2Q03358 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx2Q03358 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
Msx2Q03358 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.82□□□□□ -0.2
Msx2Q03358 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.82□□□□□ -0.2
Msx2Q03358 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.82□□□□□ -0.2
Msx2Q03358 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Msx2Q03358 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.82□□□□□ -0.2
Msx2Q03358 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msx2Q03358 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.82□□□□□ -0.2
Msx2Q03358 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Msx2Q03358 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx2Q03358 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.81□□□□□ -0.2
Msx2Q03358 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx2Q03358 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Msx2Q03358 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.81□□□□□ -0.2
Msx2Q03358 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Msx2Q03358 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx2Q03358 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.81□□□□□ -0.2
Msx2Q03358 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Msx2Q03358 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Msx2Q03358 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx2Q03358 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx2Q03358 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.8□□□□□ -0.2
Msx2Q03358 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
Msx2Q03358 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msx2Q03358 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Msx2Q03358 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx2Q03358 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms